Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm20426-201ENSMUST00000173657 440 ntBASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Mir6979-201ENSMUST00000183927 56 ntBASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Erich3-203ENSMUST00000189969 3460 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm15374-201ENSMUST00000119313 844 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm11836-201ENSMUST00000121022 441 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm8574-201ENSMUST00000203207 924 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm17825-201ENSMUST00000206836 794 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Gm8342-201ENSMUST00000209839 757 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.15□□□□□ -0.62
Upk3aQ9JKX8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk3aQ9JKX8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms