Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm43002-201ENSMUST00000200310 155 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm23105-201ENSMUST00000083719 134 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3bQ9ES34 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ube3bQ9ES34 Gm18719-201ENSMUST00000196696 1413 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gm13888-201ENSMUST00000119148 422 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gm38188-201ENSMUST00000192879 856 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms