Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Gm807-202ENSMUST00000224929 408 ntBASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Gm9899-201ENSMUST00000065519 555 ntBASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Lima1Q9ERG0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm14644-201ENSMUST00000116671 647 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm12015-201ENSMUST00000117065 843 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm15610-201ENSMUST00000120584 195 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm31256-201ENSMUST00000194705 506 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Cts7-204ENSMUST00000225321 1257 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Gm10312-201ENSMUST00000078515 489 ntBASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.46□□□□□ -0.57
Lima1Q9ERG0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lima1Q9ERG0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm11930-201ENSMUST00000117788 190 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms