Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm24934-201ENSMUST00000103764 111 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Rprl1-201ENSMUST00000158050 327 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm8652-201ENSMUST00000181363 964 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm5706-201ENSMUST00000181525 993 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm27701-201ENSMUST00000184498 110 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm13342-201ENSMUST00000121055 207 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm45668-201ENSMUST00000211271 493 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3a3Q9D554 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gm14999-201ENSMUST00000121039 624 ntBASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.68□□□□□ -0.54
Sf3a3Q9D554 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3a3Q9D554 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms