Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm11424-201ENSMUST00000121929 829 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm10268-201ENSMUST00000085340 555 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.69□□□□□ -0.54
Trim42Q9D2H5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm14999-201ENSMUST00000121039 624 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm14441-201ENSMUST00000121960 540 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm12138-201ENSMUST00000122180 951 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Rprl1-201ENSMUST00000158050 327 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm27892-201ENSMUST00000185017 106 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm17931-201ENSMUST00000208132 634 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.68□□□□□ -0.54
Trim42Q9D2H5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim42Q9D2H5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms