Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk1aQ9D132 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gm8062-201ENSMUST00000139696 444 ntBASIC10.97□□□□□ -0.65
Upk1aQ9D132 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gm5982-201ENSMUST00000196234 512 ntBASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.97□□□□□ -0.65
Upk1aQ9D132 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1aQ9D132 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm12015-201ENSMUST00000117065 843 ntBASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm12957-201ENSMUST00000117835 377 ntBASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm11500-201ENSMUST00000118237 601 ntBASIC10.96□□□□□ -0.65
Upk1aQ9D132 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Mir8093-201ENSMUST00000185043 137 ntBASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.96□□□□□ -0.65
Upk1aQ9D132 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Gm30285-201ENSMUST00000214614 422 ntBASIC10.96□□□□□ -0.65
Upk1aQ9D132 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1aQ9D132 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1aQ9D132 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Upk1aQ9D132 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1aQ9D132 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1aQ9D132 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms