Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm16459-201ENSMUST00000121443 686 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm11993-201ENSMUST00000121861 820 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm13981-201ENSMUST00000122360 447 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm44323-201ENSMUST00000198689 129 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm43249-201ENSMUST00000200464 458 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm24279-201ENSMUST00000104236 131 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm12389-201ENSMUST00000117696 418 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm20495-201ENSMUST00000173902 235 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Mir7035-201ENSMUST00000184713 82 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm6606-201ENSMUST00000193613 947 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm9369-201ENSMUST00000196009 733 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm45094-201ENSMUST00000207013 617 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm2448-201ENSMUST00000207080 559 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Cldnd1Q9CQX5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms