Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm13809-201ENSMUST00000117921 597 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm11331-201ENSMUST00000119764 288 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm8815-201ENSMUST00000173809 620 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm44100-201ENSMUST00000204329 436 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rtn4rQ99PI8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rtn4rQ99PI8 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm9062-201ENSMUST00000117712 727 ntBASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm37835-201ENSMUST00000193305 361 ntBASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Ntng1-201ENSMUST00000051253 327 ntBASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rtn4rQ99PI8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms