Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn4Q99P72 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn4Q99P72 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm14017-201ENSMUST00000121934 386 ntBASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm45186-201ENSMUST00000206874 478 ntBASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm8712-201ENSMUST00000221090 701 ntBASIC15.63■□□□□ 0.09
Rtn4Q99P72 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC15.63■□□□□ 0.09
Rtn4Q99P72 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.63■□□□□ 0.09
Rtn4Q99P72 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtn4Q99P72 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm42736-201ENSMUST00000200723 1353 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm43102-201ENSMUST00000201004 2324 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm14130-201ENSMUST00000118417 987 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm13736-201ENSMUST00000119272 253 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm27023-201ENSMUST00000182372 285 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm37241-201ENSMUST00000191736 523 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 AA914427-201ENSMUST00000193194 1166 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm6119-201ENSMUST00000193443 1206 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm43478-201ENSMUST00000200381 292 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm13097-201ENSMUST00000210722 397 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 AC153646.1-201ENSMUST00000223229 1279 ntBASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Myl1-201ENSMUST00000027151 1082 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rtn4Q99P72 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rtn4Q99P72 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms