Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm22920-201ENSMUST00000102175 109 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm14193-201ENSMUST00000105067 153 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm13916-201ENSMUST00000117368 628 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm8731-201ENSMUST00000118088 412 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm11511-201ENSMUST00000118146 540 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm13263-201ENSMUST00000121271 838 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm12164-201ENSMUST00000121695 551 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm8737-201ENSMUST00000122208 642 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm44158-201ENSMUST00000203881 505 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gm35713-201ENSMUST00000210516 199 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Cog3-203ENSMUST00000227473 4197 ntBASIC10.24□□□□□ -0.77
Scrt1Q99M85 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Scrt1Q99M85 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm25545-201ENSMUST00000122673 323 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm15744-201ENSMUST00000161734 213 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm29410-201ENSMUST00000188383 694 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm5100-201ENSMUST00000195631 589 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm7902-201ENSMUST00000198842 947 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm5298-201ENSMUST00000201122 892 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm19640-201ENSMUST00000214849 464 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm3619-201ENSMUST00000219947 775 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 AC140375.1-201ENSMUST00000225421 694 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Gm25201-201ENSMUST00000083093 170 ntBASIC10.23□□□□□ -0.77
Scrt1Q99M85 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Scrt1Q99M85 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms