Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp1b1Q99LU0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm29615-201ENSMUST00000185371 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28224-201ENSMUST00000186078 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm29001-201ENSMUST00000186177 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28292-201ENSMUST00000186593 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28101-201ENSMUST00000187608 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm29076-201ENSMUST00000187689 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28302-201ENSMUST00000187931 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28646-201ENSMUST00000188220 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28205-201ENSMUST00000189177 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm29032-201ENSMUST00000189797 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm28695-201ENSMUST00000190300 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm37448-201ENSMUST00000192795 697 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm8956-201ENSMUST00000203939 825 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm44262-201ENSMUST00000204969 372 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp1b1Q99LU0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm15236-201ENSMUST00000117309 379 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm14017-201ENSMUST00000121934 386 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm5455-201ENSMUST00000058710 715 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms