Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.26□□□□□ -0.45
Usp11Q99K46 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Gm29199-201ENSMUST00000187766 775 ntBASIC12.26□□□□□ -0.45
Usp11Q99K46 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.26□□□□□ -0.45
Usp11Q99K46 Gm5455-201ENSMUST00000058710 715 ntBASIC12.26□□□□□ -0.45
Usp11Q99K46 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.26□□□□□ -0.45
Usp11Q99K46 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm5616-201ENSMUST00000165252 384 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm8741-201ENSMUST00000174736 384 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm2260-201ENSMUST00000184965 657 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm29615-201ENSMUST00000185371 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28224-201ENSMUST00000186078 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm29001-201ENSMUST00000186177 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28292-201ENSMUST00000186593 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28101-201ENSMUST00000187608 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm29076-201ENSMUST00000187689 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28302-201ENSMUST00000187931 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28646-201ENSMUST00000188220 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28205-201ENSMUST00000189177 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm29032-201ENSMUST00000189797 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm28695-201ENSMUST00000190300 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm37448-201ENSMUST00000192795 697 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm37666-201ENSMUST00000194110 866 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 AY036118-201ENSMUST00000200021 923 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Usp11Q99K46 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.25□□□□□ -0.45
Usp11Q99K46 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp11Q99K46 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp11Q99K46 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp11Q99K46 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Usp11Q99K46 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp11Q99K46 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp11Q99K46 Gm24749-201ENSMUST00000157838 343 ntBASIC12.24□□□□□ -0.45
Usp11Q99K46 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp11Q99K46 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms