Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Gm15207-201ENSMUST00000119259 442 ntBASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Gm43002-201ENSMUST00000200310 155 ntBASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Gm8420-201ENSMUST00000097103 598 ntBASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdha3Q91Y16 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm26047-201ENSMUST00000157308 113 ntBASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm26047-202ENSMUST00000198840 115 ntBASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm5369-201ENSMUST00000217499 588 ntBASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Lect2-202ENSMUST00000225183 823 ntBASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms