Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm9192-201ENSMUST00000183221 985 ntBASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Gm44651-201ENSMUST00000207343 372 ntBASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga11Q91XY8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm38317-201ENSMUST00000195564 343 ntBASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm2553-201ENSMUST00000215986 605 ntBASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga11Q91XY8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Gm26286-201ENSMUST00000104166 134 ntBASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga11Q91XY8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 190.6 ms