Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm4482-201ENSMUST00000200876 742 ntBASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga4Q91XY4 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm23200-201ENSMUST00000104379 132 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm11450-201ENSMUST00000121144 333 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm25881-201ENSMUST00000157783 103 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Mir3102-201ENSMUST00000175555 104 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm3332-201ENSMUST00000189337 928 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm19287-201ENSMUST00000203190 358 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm6905-201ENSMUST00000205729 511 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm7848-201ENSMUST00000210739 718 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga4Q91XY4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga4Q91XY4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms