Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx1Q91VR5 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm11246-201ENSMUST00000120880 345 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Mir6546-201ENSMUST00000184460 62 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm10774-201ENSMUST00000188689 204 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm3332-201ENSMUST00000189337 928 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm7902-201ENSMUST00000198842 947 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm19091-201ENSMUST00000208120 978 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.03□□□□□ -0.48
Ddx1Q91VR5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx1Q91VR5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx1Q91VR5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx1Q91VR5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx1Q91VR5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm23596-201ENSMUST00000104304 132 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm11451-201ENSMUST00000118946 630 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Mir7076-201ENSMUST00000183519 74 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm5621-201ENSMUST00000187303 640 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx1Q91VR5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx1Q91VR5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx1Q91VR5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx1Q91VR5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx1Q91VR5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms