Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Ddx41Q91VN6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Ddx41Q91VN6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Ddx41Q91VN6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm11660-201ENSMUST00000120955 412 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm5706-201ENSMUST00000181525 993 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm44126-201ENSMUST00000204831 514 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx41Q91VN6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm17391-201ENSMUST00000171036 126 ntBASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm8285-201ENSMUST00000208293 759 ntBASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx41Q91VN6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms