Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm15432-201ENSMUST00000121106 195 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm10051-201ENSMUST00000145209 414 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm26047-201ENSMUST00000157308 113 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm10774-201ENSMUST00000188689 204 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm29499-201ENSMUST00000189151 486 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm28329-201ENSMUST00000191208 689 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm29171-201ENSMUST00000191397 486 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm26047-202ENSMUST00000198840 115 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.01□□□□□ -0.49
Rprd1aQ8VDS4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm15595-201ENSMUST00000120840 961 ntBASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm11960-201ENSMUST00000122068 925 ntBASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm44100-201ENSMUST00000204329 436 ntBASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm43773-201ENSMUST00000198548 2162 ntBASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm1840-201ENSMUST00000051687 1432 ntBASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rprd1aQ8VDS4 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rprd1aQ8VDS4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms