Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm11989-201ENSMUST00000117240 672 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm11478-201ENSMUST00000117851 599 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm11362-201ENSMUST00000118838 850 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm18187-201ENSMUST00000196476 984 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm5950-201ENSMUST00000213337 772 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Gm9230-201ENSMUST00000188228 532 ntBASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Gm43118-201ENSMUST00000199149 775 ntBASIC9.44□□□□□ -0.9
Nup35Q8R4R6 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.44□□□□□ -0.9
Nup35Q8R4R6 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.44□□□□□ -0.9
Nup35Q8R4R6 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.44□□□□□ -0.9
Nup35Q8R4R6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms