Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm35713-201ENSMUST00000210516 199 ntBASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp7Q8R1T1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Chmp7Q8R1T1 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.83□□□□□ -0.03
Chmp7Q8R1T1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Chmp7Q8R1T1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp7Q8R1T1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm39288-201ENSMUST00000210554 446 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm9111-201ENSMUST00000219394 709 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm18968-201ENSMUST00000221319 862 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp7Q8R1T1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gm11980-201ENSMUST00000121445 986 ntBASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms