Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Treml1Q8K558 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.44□□□□□ -0.58
Treml1Q8K558 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Treml1Q8K558 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Treml1Q8K558 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Treml1Q8K558 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm13045-201ENSMUST00000119019 712 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm13263-201ENSMUST00000121271 838 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm8459-201ENSMUST00000162504 760 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Treml1Q8K558 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.43□□□□□ -0.58
Treml1Q8K558 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Treml1Q8K558 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Treml1Q8K558 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.42□□□□□ -0.58
Treml1Q8K558 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Gm13611-201ENSMUST00000118269 318 ntBASIC11.42□□□□□ -0.58
Treml1Q8K558 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Gm11941-201ENSMUST00000119904 610 ntBASIC11.42□□□□□ -0.58
Treml1Q8K558 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Gm18367-201ENSMUST00000176139 600 ntBASIC11.42□□□□□ -0.58
Treml1Q8K558 Gm37835-201ENSMUST00000193305 361 ntBASIC11.42□□□□□ -0.58
Treml1Q8K558 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.42□□□□□ -0.58
Treml1Q8K558 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Treml1Q8K558 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Treml1Q8K558 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms