Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rab11fip3Q8CHD8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Mir1956-201ENSMUST00000157748 65 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm28388-201ENSMUST00000186262 437 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm37826-201ENSMUST00000195329 322 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm17825-201ENSMUST00000206836 794 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm5468-202ENSMUST00000227851 682 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm13722-201ENSMUST00000117964 3066 ntBASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rab11fip3Q8CHD8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Gm28324-201ENSMUST00000187913 264 ntBASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Gm19009-201ENSMUST00000223072 823 ntBASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab11fip3Q8CHD8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Gm8302-201ENSMUST00000119217 852 ntBASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Gm44008-201ENSMUST00000204345 412 ntBASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab11fip3Q8CHD8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab11fip3Q8CHD8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms