Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm12015-201ENSMUST00000117065 843 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm11511-201ENSMUST00000118146 540 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm13297-201ENSMUST00000120205 934 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Mir1982-201ENSMUST00000157368 74 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm3329-201ENSMUST00000159873 556 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Mospd4-201ENSMUST00000180618 576 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm43133-201ENSMUST00000197472 463 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm8956-201ENSMUST00000203939 825 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lysmd4Q8CC84 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lysmd4Q8CC84 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm11500-201ENSMUST00000118237 601 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm11425-201ENSMUST00000119608 498 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm43433-201ENSMUST00000196573 481 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm9396-201ENSMUST00000076703 567 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms