Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm9062-201ENSMUST00000117712 727 ntBASIC12.23□□□□□ -0.45
Uba3Q8C878 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm37835-201ENSMUST00000193305 361 ntBASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Uba3Q8C878 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba3Q8C878 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm14071-201ENSMUST00000117817 509 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm13045-201ENSMUST00000119019 712 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm29499-201ENSMUST00000189151 486 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm28329-201ENSMUST00000191208 689 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm29171-201ENSMUST00000191397 486 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm18065-201ENSMUST00000221395 526 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.22□□□□□ -0.45
Uba3Q8C878 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.22□□□□□ -0.45
Uba3Q8C878 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba3Q8C878 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.22□□□□□ -0.45
Uba3Q8C878 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.21□□□□□ -0.45
Uba3Q8C878 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Uba3Q8C878 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba3Q8C878 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.21□□□□□ -0.45
Uba3Q8C878 Gm11331-201ENSMUST00000119764 288 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms