Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Mir1893-201ENSMUST00000122565 83 ntBASIC15.37■□□□□ 0.05
Cps1Q8C196 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC15.37■□□□□ 0.05
Cps1Q8C196 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC15.37■□□□□ 0.05
Cps1Q8C196 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cps1Q8C196 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.36■□□□□ 0.05
Cps1Q8C196 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm42432-201ENSMUST00000197902 1617 ntBASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cps1Q8C196 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm8152-201ENSMUST00000120842 637 ntBASIC15.36■□□□□ 0.05
Cps1Q8C196 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cps1Q8C196 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Cps1Q8C196 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC15.35■□□□□ 0.05
Cps1Q8C196 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cps1Q8C196 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cps1Q8C196 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm23595-201ENSMUST00000104306 130 ntBASIC15.34■□□□□ 0.05
Cps1Q8C196 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC15.34■□□□□ 0.05
Cps1Q8C196 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cps1Q8C196 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm8756-201ENSMUST00000183250 929 ntBASIC15.34■□□□□ 0.05
Cps1Q8C196 Mir6387-201ENSMUST00000184042 108 ntBASIC15.34■□□□□ 0.05
Cps1Q8C196 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms