Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm13461-201ENSMUST00000120980 662 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm24990-201ENSMUST00000157406 323 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm23085-201ENSMUST00000157849 293 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm8459-201ENSMUST00000162504 760 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm10807-201ENSMUST00000177134 795 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm28450-201ENSMUST00000187349 638 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 AU022133-201ENSMUST00000200601 873 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Gm4978-201ENSMUST00000071565 801 ntBASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm23200-201ENSMUST00000104379 132 ntBASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm12579-201ENSMUST00000118040 783 ntBASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.96□□□□□ -0.49
Trub1Q8C0D0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trub1Q8C0D0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms