Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp47Q8BY87 AC114645.1-201ENSMUST00000215831 187 ntBASIC16.32■□□□□ 0.2
Usp47Q8BY87 AC159002.1-201ENSMUST00000226714 924 ntBASIC16.32■□□□□ 0.2
Usp47Q8BY87 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Mirlet7i-201ENSMUST00000083472 85 ntBASIC16.32■□□□□ 0.2
Usp47Q8BY87 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Erich3-203ENSMUST00000189969 3460 ntBASIC16.32■□□□□ 0.2
Usp47Q8BY87 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp47Q8BY87 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Rab3c-202ENSMUST00000223922 2398 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Btrc-209ENSMUST00000224478 2194 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 AC154537.1-201ENSMUST00000226101 1304 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm26013-201ENSMUST00000104404 119 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm17709-201ENSMUST00000174536 1096 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm8531-201ENSMUST00000188319 893 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Gm18561-201ENSMUST00000206027 804 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Nudt18-202ENSMUST00000228554 3619 ntBASIC16.31■□□□□ 0.2
Usp47Q8BY87 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp47Q8BY87 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Gm16219-201ENSMUST00000120096 274 ntBASIC16.3■□□□□ 0.2
Usp47Q8BY87 Mir1901-201ENSMUST00000122616 78 ntBASIC16.3■□□□□ 0.2
Usp47Q8BY87 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Gm7593-201ENSMUST00000187246 644 ntBASIC16.3■□□□□ 0.2
Usp47Q8BY87 Gm45219-201ENSMUST00000205602 465 ntBASIC16.3■□□□□ 0.2
Usp47Q8BY87 AC132901.1-201ENSMUST00000224345 508 ntBASIC16.3■□□□□ 0.2
Usp47Q8BY87 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Gm18806-201ENSMUST00000207607 1775 ntBASIC16.3■□□□□ 0.2
Usp47Q8BY87 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp47Q8BY87 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms