Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3Q8BRE0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm12247-201ENSMUST00000117585 670 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm5996-201ENSMUST00000211110 718 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm4978-201ENSMUST00000071565 801 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rd3Q8BRE0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Gm6407-201ENSMUST00000176468 549 ntBASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Mir8093-201ENSMUST00000185043 137 ntBASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.31□□□□□ -0.44
Rd3Q8BRE0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.31□□□□□ -0.44
Rd3Q8BRE0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.31□□□□□ -0.44
Rd3Q8BRE0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rd3Q8BRE0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms