Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm22133-201ENSMUST00000102082 109 ntBASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm5419-201ENSMUST00000119301 527 ntBASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 B9d1os-201ENSMUST00000137010 674 ntBASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4Q8BQZ5 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.27□□□□□ -0.6
Cpsf4Q8BQZ5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.27□□□□□ -0.6
Cpsf4Q8BQZ5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.27□□□□□ -0.6
Cpsf4Q8BQZ5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Gm28071-201ENSMUST00000190355 478 ntBASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Gm17827-201ENSMUST00000211825 742 ntBASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Cpsf4Q8BQZ5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Mir3102-201ENSMUST00000175555 104 ntBASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm18893-201ENSMUST00000198416 943 ntBASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm18730-201ENSMUST00000218038 343 ntBASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms