Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Depdc1bQ8BH88 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.65□□□□□ -0.39
Depdc1bQ8BH88 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Depdc1bQ8BH88 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Gm270-201ENSMUST00000223010 976 ntBASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.64□□□□□ -0.39
Depdc1bQ8BH88 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gm15004-201ENSMUST00000119192 630 ntBASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gm11660-201ENSMUST00000120955 412 ntBASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Mir1943-201ENSMUST00000158276 73 ntBASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Depdc1bQ8BH88 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Depdc1bQ8BH88 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms