Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm11244-201ENSMUST00000121243 237 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm4726-201ENSMUST00000135604 736 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm6019-201ENSMUST00000148369 736 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm8574-201ENSMUST00000203207 924 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm17831-201ENSMUST00000205579 900 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4dQ8BGV9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm12419-201ENSMUST00000116649 636 ntBASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm8737-201ENSMUST00000122208 642 ntBASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm23045-201ENSMUST00000175041 96 ntBASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm4654-201ENSMUST00000183305 982 ntBASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4dQ8BGV9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms