Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm25569-201ENSMUST00000157175 131 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm2448-201ENSMUST00000207080 559 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm11475-201ENSMUST00000118482 476 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm14497-201ENSMUST00000119537 580 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm24992-201ENSMUST00000157412 130 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm9630-201ENSMUST00000178304 885 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm13094-201ENSMUST00000117930 409 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm13827-201ENSMUST00000148801 372 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Gm37284-201ENSMUST00000193607 539 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Capsl-202ENSMUST00000226688 739 ntBASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ttc28Q80XJ3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm14165-201ENSMUST00000121456 952 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm9487-201ENSMUST00000216600 472 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms