Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh19Q80TF3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm11836-201ENSMUST00000121022 441 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh19Q80TF3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm11949-201ENSMUST00000117640 372 ntBASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms