Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm13315-201ENSMUST00000120376 991 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm6485-201ENSMUST00000160676 439 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm23045-201ENSMUST00000175041 96 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm17877-201ENSMUST00000192578 814 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm2875-201ENSMUST00000211333 360 ntBASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Prpf38bQ80SY5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm12314-201ENSMUST00000118104 538 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm8199-201ENSMUST00000121323 823 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm12783-201ENSMUST00000121425 397 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm14760-201ENSMUST00000121831 999 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm25604-201ENSMUST00000158359 133 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm25025-201ENSMUST00000175018 111 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm9630-201ENSMUST00000178304 885 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm9645-201ENSMUST00000197131 792 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm5178-201ENSMUST00000219380 898 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf38bQ80SY5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms