Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm4310-201ENSMUST00000177847 889 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm4654-201ENSMUST00000183305 982 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Mir8115-201ENSMUST00000184992 119 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm37905-201ENSMUST00000195310 341 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.88□□□□□ -0.67
Pif1Q80SX8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm16071-201ENSMUST00000119589 793 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm11836-201ENSMUST00000121022 441 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm11675-201ENSMUST00000121873 832 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Mir1901-201ENSMUST00000122616 78 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm17826-201ENSMUST00000189720 798 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.87□□□□□ -0.67
Pif1Q80SX8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pif1Q80SX8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms