Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc85bQ6PDY0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm38151-201ENSMUST00000195085 289 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm43547-201ENSMUST00000197729 328 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm6108-201ENSMUST00000208365 367 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc85bQ6PDY0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Cog3-203ENSMUST00000227473 4197 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm16459-201ENSMUST00000121443 686 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc85bQ6PDY0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc85bQ6PDY0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc85bQ6PDY0 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.15□□□□□ -0.46
Ccdc85bQ6PDY0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc85bQ6PDY0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc85bQ6PDY0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms