Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Casc4Q6P2L7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gm9192-201ENSMUST00000183221 985 ntBASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gm38117-201ENSMUST00000194653 939 ntBASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Casc4Q6P2L7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm15207-201ENSMUST00000119259 442 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm11941-201ENSMUST00000119904 610 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm11450-201ENSMUST00000121144 333 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm45575-201ENSMUST00000210283 548 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm5369-201ENSMUST00000217499 588 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Casc4Q6P2L7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms