Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gm24398-201ENSMUST00000157870 109 ntBASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdzrn3Q69ZS0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm7150-201ENSMUST00000122032 981 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm22877-201ENSMUST00000175451 105 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm8531-201ENSMUST00000188319 893 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm45594-201ENSMUST00000211717 241 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdzrn3Q69ZS0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms