Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ecm1Q61508 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ecm1Q61508 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ecm1Q61508 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.83□□□□□ -0.36
Ecm1Q61508 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ecm1Q61508 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ecm1Q61508 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ecm1Q61508 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm12663-201ENSMUST00000118481 958 ntBASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.82□□□□□ -0.36
Ecm1Q61508 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm17070-201ENSMUST00000170463 784 ntBASIC12.82□□□□□ -0.36
Ecm1Q61508 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.82□□□□□ -0.36
Ecm1Q61508 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm5700-201ENSMUST00000191483 989 ntBASIC12.82□□□□□ -0.36
Ecm1Q61508 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm44008-201ENSMUST00000204345 412 ntBASIC12.82□□□□□ -0.36
Ecm1Q61508 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.82□□□□□ -0.36
Ecm1Q61508 Gm8181-201ENSMUST00000062242 669 ntBASIC12.82□□□□□ -0.36
Ecm1Q61508 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Ecm1Q61508 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ecm1Q61508 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm11619-201ENSMUST00000117474 237 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm14234-201ENSMUST00000119539 845 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm13284-201ENSMUST00000121020 547 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm37365-201ENSMUST00000193109 409 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm2594-201ENSMUST00000214774 742 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ecm1Q61508 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm26670-202ENSMUST00000226862 340 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Ecm1Q61508 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.81□□□□□ -0.36
Ecm1Q61508 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ecm1Q61508 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms