Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm24679-201ENSMUST00000158762 111 ntBASIC10.73□□□□□ -0.69
Urb1Q571H0 Gm25053-202ENSMUST00000199731 132 ntBASIC10.73□□□□□ -0.69
Urb1Q571H0 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.73□□□□□ -0.69
Urb1Q571H0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.73□□□□□ -0.69
Urb1Q571H0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Urb1Q571H0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Urb1Q571H0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Urb1Q571H0 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.73□□□□□ -0.69
Urb1Q571H0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Urb1Q571H0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Urb1Q571H0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Urb1Q571H0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Urb1Q571H0 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Urb1Q571H0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm25998-201ENSMUST00000175397 53 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.72□□□□□ -0.69
Urb1Q571H0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Urb1Q571H0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Urb1Q571H0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Urb1Q571H0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.71□□□□□ -0.69
Urb1Q571H0 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.71□□□□□ -0.69
Urb1Q571H0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.71□□□□□ -0.69
Urb1Q571H0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.71□□□□□ -0.69
Urb1Q571H0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Gm14395-201ENSMUST00000120494 563 ntBASIC10.71□□□□□ -0.69
Urb1Q571H0 Gm13117-201ENSMUST00000120894 691 ntBASIC10.71□□□□□ -0.69
Urb1Q571H0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.71□□□□□ -0.69
Urb1Q571H0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Gm17192-201ENSMUST00000169031 511 ntBASIC10.71□□□□□ -0.69
Urb1Q571H0 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Urb1Q571H0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.71□□□□□ -0.69
Urb1Q571H0 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.71□□□□□ -0.69
Urb1Q571H0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Urb1Q571H0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Urb1Q571H0 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.71□□□□□ -0.7
Urb1Q571H0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Urb1Q571H0 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Urb1Q571H0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms