Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srrm1Q52KI8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gm12791-201ENSMUST00000120788 655 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gm9081-201ENSMUST00000182346 991 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gm18801-201ENSMUST00000186616 536 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 BC106175-202ENSMUST00000219344 1213 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm1Q52KI8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm1Q52KI8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Srrm1Q52KI8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm1Q52KI8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm1Q52KI8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm1Q52KI8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm1Q52KI8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms