Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.88□□□□□ -0.51
Spire1Q52KF3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spire1Q52KF3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm20495-201ENSMUST00000173902 235 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm43163-201ENSMUST00000196571 442 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.87□□□□□ -0.51
Spire1Q52KF3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spire1Q52KF3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm14807-201ENSMUST00000116640 983 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm14270-201ENSMUST00000118388 846 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm30671-201ENSMUST00000214898 318 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.86□□□□□ -0.51
Spire1Q52KF3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spire1Q52KF3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms