Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ddx49Q4FZF3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm13351-201ENSMUST00000118087 414 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm14270-201ENSMUST00000118388 846 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm11979-201ENSMUST00000119629 743 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm28937-201ENSMUST00000185413 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm29400-201ENSMUST00000187208 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm28662-201ENSMUST00000188446 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm28251-201ENSMUST00000188835 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm37318-201ENSMUST00000194325 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm38017-201ENSMUST00000194768 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm37287-201ENSMUST00000195449 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm37793-201ENSMUST00000195548 695 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx49Q4FZF3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Gm12218-201ENSMUST00000117666 399 ntBASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Gm44647-201ENSMUST00000207402 428 ntBASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx49Q4FZF3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ddx49Q4FZF3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms