Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Gm28450-201ENSMUST00000187349 638 ntBASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Gm7003-201ENSMUST00000195089 312 ntBASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.36□□□□□ -0.43
Syne3Q4FZC9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Gm807-202ENSMUST00000224929 408 ntBASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Gm17040-202ENSMUST00000170597 889 ntBASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Syne3Q4FZC9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms