Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm14942-201ENSMUST00000119642 336 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp48Q3V0C5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm18367-201ENSMUST00000176139 600 ntBASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm45856-201ENSMUST00000212752 416 ntBASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Gm23680-201ENSMUST00000083162 164 ntBASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp48Q3V0C5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.43□□□□□ -0.1
Usp48Q3V0C5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms