Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccbe1Q3MI99 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm4984-201ENSMUST00000115987 360 ntBASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccbe1Q3MI99 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm38111-201ENSMUST00000194817 2741 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Gm6439-201ENSMUST00000199849 862 ntBASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccbe1Q3MI99 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms