Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Gm11500-201ENSMUST00000118237 601 ntBASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Gm6621-201ENSMUST00000193251 772 ntBASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Gm21769-201ENSMUST00000211922 111 ntBASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhej1Q3KNJ2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm27501-201ENSMUST00000183599 107 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Mir8093-201ENSMUST00000185043 137 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm6439-201ENSMUST00000199849 862 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Rps4l-202ENSMUST00000204242 789 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nhej1Q3KNJ2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhej1Q3KNJ2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms