Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm24146-201ENSMUST00000082760 321 ntBASIC10.37□□□□□ -0.75
Chd8Q09XV5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.37□□□□□ -0.75
Chd8Q09XV5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Gm12481-201ENSMUST00000102482 297 ntBASIC10.37□□□□□ -0.75
Chd8Q09XV5 Gm10807-201ENSMUST00000177134 795 ntBASIC10.37□□□□□ -0.75
Chd8Q09XV5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.37□□□□□ -0.75
Chd8Q09XV5 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.37□□□□□ -0.75
Chd8Q09XV5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd8Q09XV5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm14676-201ENSMUST00000117722 858 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm42589-201ENSMUST00000199097 1751 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm15132-201ENSMUST00000118581 652 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm37678-201ENSMUST00000192908 1146 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gnpnat1-202ENSMUST00000226276 710 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm4953-201ENSMUST00000077309 483 ntBASIC10.36□□□□□ -0.75
Chd8Q09XV5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd8Q09XV5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Mir675-201ENSMUST00000102320 84 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm8111-201ENSMUST00000117659 987 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm25319-201ENSMUST00000122552 325 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm8488-201ENSMUST00000176112 1280 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.35□□□□□ -0.75
Chd8Q09XV5 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms