Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Tff1Q08423 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Tff1Q08423 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.68□□□□□ -0.86
Tff1Q08423 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.67□□□□□ -0.86
Tff1Q08423 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.67□□□□□ -0.86
Tff1Q08423 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Gm15610-201ENSMUST00000120584 195 ntBASIC9.67□□□□□ -0.86
Tff1Q08423 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.67□□□□□ -0.86
Tff1Q08423 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Gm44100-201ENSMUST00000204329 436 ntBASIC9.67□□□□□ -0.86
Tff1Q08423 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.67□□□□□ -0.86
Tff1Q08423 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.67□□□□□ -0.86
Tff1Q08423 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.67□□□□□ -0.86
Tff1Q08423 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Tff1Q08423 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tff1Q08423 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Tff1Q08423 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tff1Q08423 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.66□□□□□ -0.86
Tff1Q08423 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Tff1Q08423 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Tff1Q08423 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm44651-201ENSMUST00000207343 372 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm19994-201ENSMUST00000217086 586 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.66□□□□□ -0.86
Tff1Q08423 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.66□□□□□ -0.86
Tff1Q08423 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms