Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.46□□□□□ -0.41
VcpQ01853 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
VcpQ01853 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
VcpQ01853 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.46□□□□□ -0.42
VcpQ01853 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcpQ01853 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VcpQ01853 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.45□□□□□ -0.42
VcpQ01853 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Gm13182-201ENSMUST00000122241 312 ntBASIC12.45□□□□□ -0.42
VcpQ01853 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.45□□□□□ -0.42
VcpQ01853 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.45□□□□□ -0.42
VcpQ01853 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.45□□□□□ -0.42
VcpQ01853 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Mir7677-201ENSMUST00000184226 67 ntBASIC12.45□□□□□ -0.42
VcpQ01853 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.45□□□□□ -0.42
VcpQ01853 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.45□□□□□ -0.42
VcpQ01853 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Gm9139-201ENSMUST00000218817 700 ntBASIC12.45□□□□□ -0.42
VcpQ01853 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.45□□□□□ -0.42
VcpQ01853 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
VcpQ01853 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcpQ01853 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VcpQ01853 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Gm22133-201ENSMUST00000102082 109 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm23596-201ENSMUST00000104304 132 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm11980-201ENSMUST00000121445 986 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm4726-201ENSMUST00000135604 736 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Gm6019-201ENSMUST00000148369 736 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Mir1956-201ENSMUST00000157748 65 ntBASIC12.44□□□□□ -0.42
VcpQ01853 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Gm23771-201ENSMUST00000178702 110 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm27910-201ENSMUST00000185004 107 ntBASIC12.44□□□□□ -0.42
VcpQ01853 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Gm42518-201ENSMUST00000196277 938 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Gm45120-201ENSMUST00000208880 408 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Mt1-202ENSMUST00000211807 1085 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.44□□□□□ -0.42
VcpQ01853 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.44□□□□□ -0.42
VcpQ01853 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms